Computational Science - ICCS 2006

Third International Workshop on Simulation of Multiphysics Multiscale Systems.- Numerical Modeling of Plasma – Flow Interaction.- Numerical Methods for Reacting Gas Flow Simulations.- Reduced Flame Kinetics Via Rate-Controlled Constrained Equilibrium.- Flow Patterns in the Vicinity of Triple Line Dynamics Arising from a Local Surface Tension Model.- A Multilevel-Multigrid Approach to Multiscale Electromagnetic Simulation.- Scalable Simulation of Electromagnetic Hybrid Codes.- Numerical Modelling of Poroviscoelastic Grounds in the Time Domain Using a Parallel Approach.- Numerical Modeling of Tidal Effects and Hydrodymanics in the Po River Estuary.- Adaptive Mesh Refinement and Domain Decomposition: A Framework to Study Multi-physical and Multi-scale Phenomena. First Application to Reacting Gas Flows.- Time Splitting and Grid Refinement Methods in the Lattice Boltzmann Framework for Solving a Reaction-Diffusion Process.- Mesoscopic Simulations of Unsteady Shear-Thinning Flows.- A Multiphysics Model of Capillary Growth and Remodeling.- Liquid Computations and Large Simulations of the Mammalian Visual Cortex.- Which Meshes Are Better Conditioned: Adaptive, Uniform, Locally Refined or Locally Adjusted?.- Parallel Simulation of Three–Dimensional Bursting with MPI and OpenMP.- Numerical Simulation of Phase Transformations in Shape Memory Alloy Thin Films.- A Virtual Test Facility for Simulating Detonation-Induced Fracture of Thin Flexible Shells.- Data-Driven Inverse Modelling of Ionic Polymer Conductive Composite Plates.- Innovations in Computational Science Education.- Exploiting Real-Time 3d Visualisation to Enthuse Students: A Case Study of Using Visual Python in Engineering.- Involving Undergraduates in Computational Science and Engineering Research: Successes and Challenges.- A Project Based Approach to Teaching Parallel Systems.- Learning by Doing: Software Projects in CSE Education.- Computational Math, Science, and Technology (CMST): A Strategy to Improve STEM Workforce and Pedagogy to Improve Math and Science Education.- The School of Computational Science at Florida State University.- Teaching the Foundations of Computational Science on the Undergraduate Level.- Computational Science: An Intermingling of Science, Mathematics, and Computer Science.- A Framework for Conceptually Modelling the Domain Knowledge of an Instructional System.- Platyhelminthes Are [Re]constructed Recursively.- Fifth International Workshop on Computer Graphics and Geometric Modeling (CGGM 2006).- Extensions for 3D Graphics Rendering Engine Used for Direct Tessellation of Spline Surfaces.- An Evolution Computation Based Approach to Synthesize Video Texture.- Deformation of Dynamic Surfaces.- A New Smoothing Algorithm for Quadrilateral and Hexahedral Meshes.- The Calculation of Parametric NURBS Surface Interval Values Using Neural Networks.- Characterizing and Covering Some Subclasses of Orthogonal Polygons.- Techniques for Computing Viewpoint Entropy of a 3D Scene.- 3D Object Repair Using 2D Algorithms.- Extraction of Ridges-Valleys for Feature-Preserving Simplification of Polygonal Models.- Multiresolution 3D Rendering on Mobile Devices.- Multiresolution Remeshing Using Weighted Centroidal Voronoi Diagram.- Metric 3D Surface Mesh Generation Using Delaunay Criteria.- A Multiresolution Model for Non-photorealistic Rendering of Trees.- Model Creation by Velocity Controlled Surface Deformation.- Rendering of Unorganized Points with Octagonal Splats.- Statistical Based Vectorization for Standard Vector Graphics.- Robustly Computing Intersection Curves of Two Canal Surfaces with Quadric Decomposition.- Triangle Strip Multiresolution Modelling Using Sorted Edges.- Improvement Construction for Planar G2 Transition Curve Between Two Separated Circles.- B-Spline Curve Fitting Using Dominant Points.- Quality and Performance Evaluation of Ray-Space Interpolation for Free Viewpoint Video Systems.- Framework for Adaptive Sampling of Point-Based Surfaces Using Geometry and Color Attributes.- Fourth International Workshop on Computer Algebra Systems and Applications (CASA 2006).- Normalizing Relational Database Schemas Using Mathematica.- Extending Maple Capabilities for Solving and Displaying Inequalities.- Phase Response Curves, Delays and Synchronization in Matlab.- A Hybrid Approach for Normal Factorization of Polynomials.- Computer Algebra for the Formation of Structural Matrices of Piezoceramic Finite Elements.- Symbolic Analysis of Economical Models with Mathematica.- Polarizable Theta-Stable Parabolic Subalgebras and K ?-Saturation in the Non-compact Real Forms of G 2 and F 4.- Dynamic Load Balancing with MatlabMPI.- Maple Implementation of the Chor-Rivest Cryptosystem.- Development of TRIP: Fast Sparse Multivariate Polynomial Multiplication Using Burst Tries.- A Symbolic Approach to Quantum Computation Simulation.- Development of SyNRAC.- Automated Discovery in Elementary Extrema Problems.- Stabilizing Second-Order Linear Dynamic Systems Via Hybrid Output Feedback Controls.- Computation of the Adjoint Matrix.- MathBlackBoard as Effective Tool in Classroom.- Tools for Program Development and Analysis in Computational Science.- Finding Inefficiencies in OpenMP Applications Automatically with Periscope.- Analysis of the Spatial and Temporal Locality in Data Accesses.- A Performance Profile and Test Tool for Development of Embedded Software Using Various Report Views.- SCE Toolboxes for the Development of High-Level Parallel Applications.- Introducing the Open Trace Format (OTF).- Dynamic Instrumentation of Distributed Java Applications Using Bytecode Modifications.- Fine-Grained Instrumentation and Monitoring of Legacy Applications in a Service-Oriented Environment.- Monitoring of WS-Based Applications.- Using Sequential Debugging Techniques with Massively Parallel Programs.- Collaborative and Cooperative Environments.- Workflow for Integrated Object Detection in Collaborative Video Annotation Environments.- RMIX: A Dynamic, Heterogeneous, Reconfigurable Communication Framework.- Developing Collaborative Social Software.- An Efficient and Reflective Event Filtering for Context-Awareness in Ubiquitous Computing.- Creation and Control of Interactive Virtual Environments.- Using Haptics to Improve Immersion in Virtual Environments.- A Novel Navigation Algorithm for Locomotion Interfaces with Programmable Platforms.- Second International Workshop on Bioinformatics Research and Applications (IWBRA06).- Efficient and Practical Algorithms for Deducing the History of Recombination in Populations.- Chordal Graphs in Computational Biology – New Insights and Applications.- Exemplar Longest Common Subsequence.- Synonymous Codon Substitution Matrices.- SEPA: Approximate Non-subjective Empirical p-Value Estimation for Nucleotide Sequence Alignment.- Multiple Sequence Alignment by Ant Colony Optimization and Divide-and-Conquer.- COMBAT: Search Rapidly for Highly Similar Protein-Coding Sequences Using Bipartite Graph Matching.- Missing Values Estimation in Microarray Data with Partial Least Squares Regression.- Boost Feature Subset Selection: A New Gene Selection Algorithm for Microarray Dataset.- A Hybrid Feature Selection Approach for Microarray Gene Expression Data.- A Self-supervised Learning Framework for Classifying Microarray Gene Expression Data.- Pooling Evidence to Identify Cell Cycle–Regulated Genes.- Discovering Sequence-Structure Patterns in Proteins with Variable Secondary Structure.- Clustering Support Vector Machines and Its Application to Local Protein Tertiary Structure Prediction.- Extracting Protein-Protein Interactions from the Literature Using the Hidden Vector State Model.- A Multilevel Approach to Identify Functional Modules in a Yeast Protein-Protein Interaction Network.- Towards Detecting Protein Complexes from Protein Interaction Data.- High-Throughput SNP Genotyping by SBE/SBH.- Tag SNP Selection Based on Multivariate Linear Regression.- Minimum Multicolored Subgraph Problem in Multiplex PCR Primer Set Selection and Population Haplotyping.- Phasing of 2-SNP Genotypes Based on Non-random Mating Model.- Event Models for Tumor Classification with SAGE Gene Expression Data.- Genomes Containing Duplicates Are Hard to Compare.- Rearrangement of Noisy Genomes.- Simple Reconstruction of Binary Near-Perfect Phylogenetic Trees.- Reconstructing Ancestor-Descendant Lineages from Serially-Sampled Data: A Comparison Study.- Robustness of Greedy Type Minimum Evolution Algorithms.- Space and Time Efficient Algorithms for Planted Motif Search.- Predictability of Rules in HIV-1 Protease Cleavage Site Analysis.- Statistical Feature Selection from Chaos Game Representation for Promoter Recognition.- Blue Matter: Strong Scaling of Molecular Dynamics on Blue Gene/L.- DigitalTree: A Tool for Displaying Biological Data in Tree Structure.- HiSP: A Probabilistic Data Mining Technique for Protein Classification.- Cross-Ontological Analytics: Combining Associative and Hierarchical Relations in the Gene Ontologies to Assess Gene Product Similarity.- A GO-Based Method for Assessing the Biological Plausibility of Regulatory Hypotheses.- Delays in Biological Regulatory Networks (BRN).- Phase Transitions in Gene Knockdown Networks of Transitive RNAi.- Third International Workshop on Practical Aspects of High-Level Parallel Programming (PAPP 2006).- Compile-Time Energy Optimization for Parallel Applications in On-Chip Multiprocessors.- Using SBASCO to Solve Reaction-Diffusion Equations in Two-Dimensional Irregular Domains.- Higher Order Flattening.- Combining Measurement and Stochastic Modelling to Enhance Scheduling Decisions for a Parallel Mean Value Analysis Algorithm.- Joint Structured/Unstructured Parallelism Exploitation in muskel.- Co-Array Collectives: Refined Semantics for Co-Array Fortran.- An Approach to Buffer Management in Java HPC Messaging.- Wireless and Mobile Systems.- A Low Complexity and Robust Frequency Offset Estimation Algorithm for OFDM-Based WLAN Systems.- Simplified Signal Detection for BLAST Architecture with ML and DFE Detectors.- Scenario Decomposition Based Analysis of Next Generation Mobile Services.- A Power Saving Scheme for Integrated WLAN and Cellular Networks.- The Optimal Subchannel and Bit Allocation Problem for OFDM.- Bluetooth Broadcasting Performance: Reliability and Throughput.- An Optimized Two Factor Authenticated Key Exchange Protocol in PWLANs.- Adaptive Clustering with Virtual Subnets Support in Ad Hoc Networks.- A Service Management Architecture for NEMO in IPv4 and IPv6 Networks.- Overlapped Detection Via Approximate Entropy Estimation Against Flooding Attack in Mobile Sensor Networks.- Implementation of Next Generation Mobile Service: The Context-Aware Follow-Me Service.- Multi-piconet Formation to Increase Channel Utilization in IEEE 802.15.3 High-Rate WPAN.- Unencapsulated Mobile Multicast Routing for Next Generation Video Networks.- Channel Estimation of High Rate WPAN System with Diversity Technique.- A Timestamp Tree-Based Cache Invalidation Report Scheme in Mobile Computing Environments.- Clustering Versus Evenly Distributing Energy Dissipation in Wireless Sensor Routing for Prolonging Network Lifetime.- On the Effect of Heterogeneous Traffic Sources on the Network Availability for Wireless Sensor Grids.- Selective Handover Technique on Multihomed Mobile Network Environment.- Collaborative Trust-Based Shortest Secure Path Discovery in Mobile Ad Hoc Networks.- An Efficient Neighbor Knowledge Based Broadcasting for Mobile Ad Hoc Networks.- Maximum Lifetime Paths for the High Packet Delivery Ratio Using Fast Recovery in a Mobile Ad Hoc Network.- Erratum.- Synonymous Codon Substitution Matrices.- Compile-Time Energy Optimization for Parallel Applications in On-Chip Multiprocessors.